Creating binding-site residue list Creating molecular surface real 0m1.825s user 0m0.302s sys 0m0.144s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1215 spheres. 102. 102. 102. 102. 103. 103. 105. 105. 105. 119. 119. 123. 123. 123. 123. 123. 123. 123. 123. 123. 123. 123. 123. 127. 127. 128. 128. 128. 129. 129. 129. 129. 129. 129. 131. 131. 131. 132. 132. 134. 137. 137. 137. 137. 137. 137. 137. 137. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 140. 141. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 142. 143. 143. 145. 145. 145. 146. 146. 146. 146. 146. 146. 146. 146. 146. 146. 146. 146. 146. 146. 147. 148. 148. 148. 150. 156. 156. 156. 156. 156. 156. 156. 156. 156. 156. 156. 156. 156. 156. 156. 156. 156. 157. 157. 157. 157. 157. 157. 157. 157. 157. 157. 157. 159. 159. 159. 160. 160. 160. 160. 161. 161. 161. 161. 161. 161. 161. 161. 163. 163. 163. 163. 163. 163. 163. 164. 164. 164. 164. 164. 166. 167. 167. 167. 167. 167. 168. 168. 168. 168. 168. 168. 168. 168. 168. 168. 168. 168. 168. 168. 169. 169. 169. 170. 170. 170. 170. 170. 170. 170. 170. 170. 170. 170. 170. 170. 170. 170. 170. 171. 171. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 175. 178. 178. 182. 183. 183. 183. 183. 183. 183. 183. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 193. 193. 201. 201. 201. 201. 203. 203. 203. 203. 203. 205. 205. 214. 214. 214. 287. 287. 287. 287. 287. 287. 287. 287. 287. 287. 287. 288. 288. 288. 288. 288. 288. 288. 288. 289. 300. 302. 302. 302. 302. 302. 302. 302. 302. 302. 302. 302. 302. 314. 314. 314. 314. 314. 314. 314. 314. 316. 316. 316. 316. 316. 316. 316. 317. 317. 317. 317. 317. 317. 317. 317. 317. 317. 318. 322. 322. 370. 370. 370. 370. 370. 371. 371. 372. 372. 372. 372. 373. 373. 373. 373. 373. 373. 373. 373. 373. 373. 374. 374. 374. 374. 374. 374. 374. 374. 374. 374. 401. 401. 401. 403. 404. 404. 404. 404. 405. 405. 405. 405. 405. 405. 405. 405. 405. 405. 406. 406. 406. 406. 406. 406. 406. 407. 407. 407. 407. 407. 407. 407. 407. 407. 407. 407. 407. 407. 407. 407. 407. 407. 433. 433. 433. 433. 433. 433. 434. 434. 434. 434. 434. 434. 434. 434. 434. 434. 434. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 435. 436. 436. 436. 438. 438. 438. 438. 438. 438. 438. 438. 440. 441. 441. 441. 442. 442. 442. 442. 442. 442. 442. 442. 443. 444. 445. 450. 450. 450. 450. 450. 450. 450. 450. 452. 452. 455. 455. 455. 455. 455. 455. 455. 455. 455. 455. 455. 455. 455. 455. 455. 455. 460. 460. 460. 460. 461. 461. 461. 461. 461. 461. 461. 462. 462. 462. 468. 469. 469. 469. 469. 469. 469. 469. 470. 474. 474. 474. 474. 474. 474. 474. 474. 474. 474. 474. 477. 477. 478. 478. 478. 478. 479. 479. 479. 479. 479. 479. 479. 479. 479. 491. 491. 491. 491. 491. 492. 492. 534. 543. 544. 544. 544. 544. 544. 544. 544. 544. 544. 550. 550. 550. 550. 550. 550. 551. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 554. 554. 554. 554. 554. 569. 569. 569. 570. 570. 620. 620. 620. 620. 626. 626. 626. 626. 642. 649. 649. 649. 649. 649. 649. 665. 665. 665. 665. 665. 665. 665. 665. 665. 665. 665. 665. 665. 665. 667. 667. 667. 669. 670. 670. 670. 670. 670. 673. 673. 673. 673. 673. 673. 678. 678. 678. 678. 678. 683. 684. 684. 685. 685. 685. 686. 689. 689. 689. 689. 691. 691. 693. 693. 693. 697. 697. 698. 699. 700. 700. 700. 700. 700. 700. 700. 700. 700. 700. 700. 700. 703. 703. 703. 704. 704. 704. 704. 704. 704. 704. 704. 704. 704. 705. 705. 705. 705. 705. 707. 707. 707. 707. 707. 707. 707. 707. 707. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 711. 711. 712. 712. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 714. 715. 717. 717. 721. 721. 724. 742. 742. 745. 745. 745. 745. 746. 746. 746. 746. 746. 747. 747. 747. 747. 747. 747. 747. 747. 747. 747. 748. 748. 748. 748. 748. 748. 748. 748. 748. 748. 748. 748. 748. 748. 748. 748. 752. 757. 757. 757. 757. 757. 757. 757. 757. 757. 760. 760. 760. 760. 760. 760. 760. 760. 760. 760. 760. 760. 760. 760. 760. 760. 760. 782. 782. 782. 782. 782. 782. 782. 782. 783. 783. 783. 783. 786. 786. 787. 787. 788. 788. 788. 788. 788. 788.1039.1039.1039.1039.1040.1040.1040.1040.1040.1040.1040.1040.1040.1040.1045.1045.1045.1084.1084.1084.1088.1089.1089.1090.1090.1090.1090.1090.1090.1090.1090.1090.1090.1090.1090.1090.1090.1090.1090.1090.1091.1093.1093.1093.1093.1100.1100.1101.1101.1101.1101.1102.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1116.1116.1116.1116.1116.1116.1116.1116.1116.1125.1125.1125.1126.1127.1127.1127.1127.1127.1127.1129.1129.1129.1129.1129.1129.1129.1129.1129.1131.1131.1133.1133.1133.1133.1133.1133.1134.1135.1135.1135.1135.1135.1135.1135.1171.1171.1171.1171.1171.1171.1177.1178.1178.1178.1178.1178.1178.1178.1178.1178.1178.1178.1178.1178.1185.1185.1185.1185.1185.1185.1185.1185.1185.1185.1185.1185.1185.1185.1185.1194.1194.1194.1197.1199.1200.1200.1200.1203.1203.1203.1203.1203.1203.1204.1204.1205.1205.1205.1205.1205.1205.1205.1205.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1208.1208.1208.1208.1208.1208.1209.1209.1209.1209.1209.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1212.1212.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1214.1214.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 20m39.430s user 20m38.508s sys 0m0.121s Heavy solvent excluded grid being made FORTRAN STOP real 31m34.906s user 29m18.511s sys 0m0.110s