There are 29 ligand heavy atoms Ligand center of coords (x y z): 16.1955172413793 14.5872068965517 3.93813793103448 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 13816 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9524 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9524 Number of spheres polar: 5629, nonpolar: 3316, out of current total: 9524 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 4.20940 28.19080 2.59220 26.57980 -8.06180 15.93200 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1784 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 643 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 635 Spheres center of coords (x y z): 13.3163968503937 16.4703486614173 3.44073228346457 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 11.2065924566509 Final number of output spheres is: 120 Number of polar spheres: 48 Number of nonpolar spheres: 68 Number of spheres that are near neither polar nor nonpolar receptor atoms: 4 Final number of spheres that are from crystallographic ligand: 29