Creating binding-site residue list Creating molecular surface real 0m2.270s user 0m0.280s sys 0m0.174s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1070 spheres. 101. 101. 101. 102. 102. 102. 102. 102. 102. 102. 102. 103. 103. 103. 103. 103. 103. 105. 105. 105. 105. 105. 105. 105. 105. 105. 105. 106. 113. 120. 120. 120. 120. 120. 120. 120. 120. 120. 120. 120. 120. 120. 120. 121. 121. 121. 121. 121. 121. 121. 121. 121. 121. 122. 122. 122. 122. 122. 130. 130. 130. 130. 130. 130. 130. 130. 133. 133. 133. 133. 133. 135. 135. 135. 135. 135. 135. 135. 138. 139. 139. 370. 370. 370. 370. 370. 372. 372. 372. 372. 372. 376. 376. 376. 376. 376. 376. 410. 410. 410. 410. 410. 410. 411. 411. 411. 411. 411. 411. 413. 413. 417. 420. 420. 420. 420. 420. 420. 420. 420. 420. 421. 421. 421. 421. 421. 422. 422. 422. 422. 422. 422. 422. 422. 422. 422. 422. 422. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 428. 428. 428. 428. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 430. 430. 430. 443. 443. 443. 443. 443. 443. 443. 443. 443. 444. 444. 444. 444. 444. 445. 445. 445. 445. 445. 445. 446. 446. 446. 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489. 489. 489. 490. 490. 490. 490. 490. 490. 490. 490. 507. 507. 507. 507. 507. 507. 507. 507. 507. 507. 507. 507. 507. 521. 611. 611. 611. 611. 611. 613. 613. 613. 616. 616. 616. 761. 761. 775. 781. 785. 785. 785. 785. 785. 785. 786. 786. 786. 786. 786. 786. 786. 789. 805. 806. 806. 806. 806. 806. 806. 806. 806. 806. 813. 813. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 816. 816. 816. 816. 816. 816. 823. 823. 872. 872. 873. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 874. 876. 876. 876. 878. 879. 879. 879. 879. 885. 885. 885. 885. 885. 885. 885. 888. 888. 888. 888. 888. 888. 888. 892. 893. 894. 894. 894. 894. 901. 902. 903. 904. 904. 904. 904. 904. 904. 904. 904. 904. 904. 904. 904.1175.1175.1175.1190.1190.1191.1191.1191.1191.1191.1191.1191.1191.1191.1191.1191.1191.1191.1191.1191.1191.1196.1196.1201.1201.1201.1201.1201.1205.1206.1206.1206.1206.1206.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1208.1208.1208.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1212.1212.1212.1212.1212.1212.1212.1212.1212.1212.1212.1212.1212.1212.1212.1212.1212.1221.1221.1221.1241.1248.1248.1248.1248.1248.1248.1248.1420.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1422.1423.1423.1423.1423.1423.1423.1423.1423.1423.1423.1423.1423.1423.1424.1424.1424.1424.1424.1424.1424.1424.1424.1424.1424.1424.1424.1424.1424.1424.1426.1426.1426.1426.1426.1426.1426.1426.1429.1429.1429.1429.1429.1429.1429.1429.1429.1429.1429.1429.1429.1429.1429.1432.1432.1432.1432.1432.1432.1436.1436.1436.1436.1438.1438.1438.1441.1441.1441.1441.1447.1447.1448.1448.1448.1448.1448.1448.1448.1448.1448.1448.1448.1448.1448.1448.1448.1451.1452.1452.1452.1452.1452.1452.1452.1452.1452.1452.1453.1455.1455.1455.1455.1456.1456.1456.1456.1456.1646.1646.1646.1648.1648.1650.1650.1650.1650.1650.1650.1650.1650.1650.1650.1650.1650.1650.1664.1664.1664.1664.1664.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1667.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1668.1669.1669.1669.1673.1673.1673.1674.1674.1674.1674.1674.1675.1675.1675.1675.1675.1675.1675.1675.1675.1675.1675.1675.1675.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1676.1824.2043.2043.2043.2043.2049.2049.2049.2049.2069.2071.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2073.2074.2074.2074.2074.2074.2074.2074.2074.2074.2074.2076.2076.2076.2076.2076.2076.2076.2076.2076.2076.2076.2076.2076.2076.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2288.2288.2288.2288.2288.2288.2288.2288.2295.2297.2297.2297.2302.2302.2302.2302.2302.2302.2302.2302.2302.2302.2302.2324.2324.2324.2324.2324.2324.2645.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 15m5.700s user 12m12.408s sys 0m0.104s Heavy solvent excluded grid being made FORTRAN STOP real 19m23.743s user 17m2.450s sys 0m0.107s