There are 21 ligand heavy atoms Ligand center of coords (x y z): 26.3762857142857 5.10304761904762 1.89880952380952 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 1562 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1271 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1271 Number of spheres polar: 321, nonpolar: 792, out of current total: 1271 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 14.55239 38.35835 -6.82162 17.01408 -10.08732 13.89834 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 349 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 269 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 170 Spheres center of coords (x y z): 31.0800984705882 4.70798723529412 -0.916229470588235 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 5.95863573327863 Final number of output spheres is: 120 Number of polar spheres: 41 Number of nonpolar spheres: 71 Number of spheres that are near neither polar nor nonpolar receptor atoms: 8 Final number of spheres that are from crystallographic ligand: 21