Creating binding-site residue list Creating molecular surface real 0m2.022s user 0m0.301s sys 0m0.218s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1391 spheres. 78. 78. 79. 79. 79. 79. 79. 79. 79. 79. 79. 79. 81. 86. 86. 86. 86. 86. 86. 86. 86. 86. 86. 86. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 88. 89. 89. 89. 89. 89. 89. 89. 89. 89. 89. 89. 89. 89. 89. 90. 90. 90. 90. 90. 90. 90. 90. 90. 90. 90. 96. 96. 96. 96. 96. 97. 97. 98. 98. 100. 100. 100. 103. 103. 103. 103. 103. 104. 105. 105. 105. 105. 106. 106. 106. 106. 107. 108. 108. 108. 108. 108. 108. 108. 108. 108. 108. 108. 108. 108. 108. 108. 108. 111. 111. 111. 111. 111. 113. 118. 129. 129. 135. 137. 137. 137. 137. 137. 137. 137. 137. 137. 137. 137. 137. 137. 137. 137. 137. 237. 239. 246. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 251. 260. 260. 260. 260. 262. 262. 266. 271. 272. 273. 273. 273. 273. 275. 275. 275. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 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567. 572. 572. 574. 574. 574. 574. 574. 577. 577. 577. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 755. 755. 783. 785. 785. 785. 785. 786. 787. 787. 787. 787. 787. 787. 788. 788. 788. 788. 788. 788. 788. 788. 788. 788. 788. 789. 789. 789. 790. 790. 790. 790. 790. 790. 790. 790. 790. 790. 790. 790. 790. 791. 791. 791. 791. 791. 792. 792. 792. 792. 792. 792. 792. 792. 792. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 793. 794. 794. 794. 794. 794. 794. 794. 794. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 795. 796. 796. 796. 802. 802. 802. 802. 802. 802. 802. 802. 802. 802. 802. 802. 804. 804. 804. 804. 804. 804. 804. 804. 804. 807. 807. 807. 807. 807. 807. 808. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 810. 811. 811. 811. 811. 811. 811. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 815. 818. 818. 821. 821. 821. 821. 821. 821. 821. 821. 821. 821. 821. 821. 821. 823. 823. 823. 823. 823. 823. 823. 823. 823. 824. 824. 824. 824. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 825. 830. 830. 830. 830. 830. 830. 830. 833. 833. 833. 838. 838. 838. 840. 840. 840. 840. 840. 840. 841. 841. 841. 841. 841. 841. 841. 841. 841. 841. 841. 841. 841. 841. 843. 843. 843. 855. 855. 855. 855. 855. 855. 855. 855. 855. 855. 855. 855. 855. 855. 855. 855. 862. 865. 885. 885. 885. 886. 886. 886. 886. 886. 886. 886. 886. 886. 894. 894. 894. 894. 894. 894. 894. 894. 894. 894. 894. 898. 898. 898. 898. 898. 898. 898. 898. 898. 898. 898. 898. 898. 898. 898. 898. 900. 901. 901. 906. 906. 906. 906. 906. 906. 910. 910. 910. 910. 910. 910. 910. 910. 910. 910. 910. 910. 939. 939. 939. 939. 939. 939. 939. 939. 939. 940. 940. 940. 940. 940. 940. 941. 941. 941. 941. 941. 941. 941. 941. 941. 942. 942. 942. 942. 942. 942. 944. 944. 944. 944. 956. 957. 957. 957. 957. 958. 958. 958. 958. 958. 958. 958. 959. 959. 959. 959. 959. 959. 960. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961. 961.1155.1155.1155.1155.1155.1155.1155.1160.1479.1479.1483.1483.1483.1485.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1486.1487.1670.1674.1676.1676.1676.1676.1676.1677.1677.1677.1677.1677.1677.1677.1677.1689.1689.1691.1691.1691.1691.1695.1704.1704.1706.1706.1706.1706.1706.1706.1706.1706.1714.1714.1714.1714.1715.1715.1715.1715.1715.1715.1715.1715.1715.1715.1715.1715.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1716.1722.1722.1722.1722.1722.1722.1722.1722.1722.1722.1722.1722.1723.1728.1728.1728.1728.1729.1729.1729.1729.1729.1729.1729.1730.1735.1735.1736.1736.1736.1736.1736.1736.1736.1736.1736.1736.1737.1737.1737.1737.1737.1737.1737.1738.1738.1738.1738.1738.1738.1738.1738.1738.1738.1738.1738.1738.1738.1738.1746.1746.1746.1746.1746.1746.1746.1753.1753.1755.1755.1755.1755.1755.1755.1755.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1756.1757.1757.1757.1757.1757.2243.2243.2243.2243.2243.2246.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2249.2249.2249.2249.2249.2250.2250.2250.2250.2250.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2251.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2252.2373.2373.2373.2376.2376.2376.2386.2389.2389.2389.2389.2389.2389.2389.2389.2390.2394.2396.2396.2396.2396.2396.2396.2396.2396.2396.2396.2397.2397.2397.2397.2398.2398.2398.2398.2398.2398.2398.2398.2398.2398.2399.2399.2399.2399.2399.2399.2399.2399.2402.2402.2402.2402.2402.2402.2402.2402.2403.2403.2403.2403.2403.2403.2403.2403.2403.2413.2415.2415.2415.2415.2416.2416.2416.2416.2416.2416.2416.2416.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2419.2419.2419.2419.2419.2419.2419.2419.2419.2419.2419.2419.2419.2421.2436.2436.2436.2436.2436.2436.2436.2436.2436.2436.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2444.2459.2459.2459.2459.2459.2459.2459.2459.2459.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 17m30.066s user 15m10.215s sys 0m0.053s Heavy solvent excluded grid being made FORTRAN STOP real 34m40.069s user 21m37.340s sys 0m0.073s