There are 28 ligand heavy atoms Ligand center of coords (x y z): 5.37360714285714 43.745 50.9359285714286 useligsph not on Starting number of spheres from sph/sph cluster 0: 1223 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 942 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 935 Number of spheres polar: 281, nonpolar: 387, out of current total: 935 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.54582 17.19466 31.86125 55.71129 39.19918 62.60643 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 356 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 302 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 5.37360714285714 43.745 50.9359285714286 Center point: 41 xyz: 5.55593 43.83541 50.87977 After continuity checking, number of spheres is: 272 Spheres center of coords (x y z): 2.77926459558823 41.3360138602941 50.2866353676471 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 11.7518461538462 46.5712689155108 58.0877052332914 Average weighted-distance for final elimination is: 33.1387205968032 Final number of output spheres is: 120 Number of polar spheres: 49 Number of nonpolar spheres: 53 Number of spheres that are near neither polar nor nonpolar receptor atoms: 18 Final number of spheres that are from crystallographic ligand: 0