usefragsph not on
There are 19 ligand heavy atoms
Ligand center of coords (x y z): 2.71563157894737 7.67915789473684 29.0528421052632
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1539
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 928
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 928
Number of spheres polar: 252, nonpolar: 448, out of current total: 928
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.14118 12.69736 -2.29690 17.59752 19.06318 39.02555
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 522
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 451
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 425
Spheres center of coords (x y z): 3.52914896470588 9.78007077647058 29.4024588941176
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.01852962054254
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 19