usefragsph not on
There are 32 ligand heavy atoms
Ligand center of coords (x y z): 5.229375 26.1499375 25.7385
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1100
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 678
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 678
Number of spheres polar: 179, nonpolar: 303, out of current total: 678
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.10537 15.19223 16.21766 36.12049 15.79341 35.71803
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 249
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 199
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 193
Spheres center of coords (x y z): 3.71737466321243 27.2816910880829 26.081851865285
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.29379743580093
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 32