Creating binding-site residue list Creating molecular surface real 0m2.740s user 0m0.435s sys 0m0.387s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1437 spheres. 43. 43. 43. 271. 271. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 272. 299. 299. 299. 299. 299. 299. 299. 299. 299. 310. 311. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 313. 313. 313. 313. 313. 313. 313. 313. 313. 313. 313. 313. 313. 313. 313. 313. 313. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 323. 324. 324. 324. 324. 324. 324. 325. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 327. 327. 327. 327. 327. 328. 328. 328. 328. 330. 330. 332. 332. 334. 334. 334. 334. 334. 334. 334. 334. 334. 334. 334. 334. 334. 334. 335. 335. 341. 341. 341. 341. 357. 359. 359. 359. 359. 359. 359. 359. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 361. 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998.1006.1006.1006.1006.1006.1006.1006.1006.1006.1006.1006.1006.1007.1007.1007.1007.1007.1007.1007.1007.1013.1018.1018.1019.1019.1019.1019.1019.1019.1019.1020.1020.1020.1020.1020.1020.1020.1020.1027.1027.1027.1027.1027.1027.1030.1030.1032.1040.1047.1047.1048.1048.1049.1049.1049.1049.1053.1053.1053.1054.1054.1054.1054.1054.1054.1054.1054.1054.1055.1055.1055.1055.1055.1055.1055.1056.1056.1227.1229.1252.1252.1252.1252.1261.1262.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1264.1265.1265.1265.1265.1265.1265.1265.1265.1265.1265.1265.1265.1265.1265.1265.1265.1266.1266.1266.1266.1266.1266.1273.1274.1274.1274.1274.1276.1276.1276.1276.1276.1290.1290.1291.1291.1291.1291.1291.1291.1291.1291.1291.1291.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1299.1299.1299.1299.1299.1299.1301.1301.1301.1301.1301.1301.1301.1301.1301.1301.1303.1303.1303.1303.1303.1303.1303.1303.1303.1303.1303.1303.1303.1305.1305.1308.1308.1308.1308.1310.1310.1310.1310.1310.1310.1310.1310.1310.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1311.1313.1313.1313.1313.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1318.1323.1323.1323.1323.1323.1326.1326.1326.1326.1326.1326.1327.1327.1327.1327.1327.1327.1327.1327.1333.1333.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1339.1339.1340.1340.1340.1340.1341.1341.1341.1342.1342.1342.1342.1342.1342.1342.1342.1342.1342.1342.1342.1342.1342.1343.1343.1343.1343.1343.1343.1343.1343.1349.1350.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1355.1355.1355.1355.1355.1355.1355.1355.1356.1356.1356.1356.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1362.1362.1362.1362.1363.1363.1363.1363.1363.1363.1363.1364.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1446.1447.1447.1447.1447.1447.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1449.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1451.1452.1452.1452.1452.1453.1453.1453.1453.1453.1453.1453.1455.1455.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1461.1461.1461.1462.1462.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1464.1466.1466.1466.1471.1471.1471.1473.1473.1476.1476.1476.1476.1476.1476.1477.1478.1478.1478.1478.1478.1478.1478.1478.1478.1478.1478.1478.1478.1478.1487.1487.1487.1489.1489.1489.1489.1489.1489.1489.1489.1489.1489.1490.1491.1491.1491.1491.1492.1492.1492.1497.1497.1497.1499.1499.1499.1499.1499.1499.1499.1499.1499.1499.1499.1499.1500.1500.1500.1500.1500.1500.1500.1500.1500.1504.1506.1511.1514.1514.1514.1514.1514.1514.1514.1514.1514.1514.1515.1515.1515.1515.1516.1516.1516.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 26m53.936s user 26m53.432s sys 0m0.224s Heavy solvent excluded grid being made FORTRAN STOP real 36m38.827s user 36m38.187s sys 0m0.272s