Creating binding-site residue list Creating molecular surface real 0m1.337s user 0m0.213s sys 0m0.144s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1210 spheres. 1. 1. 1. 5. 5. 14. 14. 14. 191. 191. 191. 191. 191. 191. 191. 192. 192. 192. 192. 192. 192. 192. 192. 192. 192. 193. 193. 193. 193. 193. 193. 193. 193. 194. 194. 194. 194. 194. 194. 194. 194. 194. 194. 194. 194. 194. 194. 194. 194. 208. 208. 208. 208. 208. 313. 316. 316. 316. 316. 316. 316. 348. 348. 348. 348. 348. 348. 348. 348. 348. 348. 348. 348. 348. 348. 348. 348. 349. 349. 350. 350. 350. 350. 350. 350. 350. 350. 350. 351. 351. 351. 351. 351. 351. 351. 351. 351. 351. 351. 351. 351. 351. 351. 351. 352. 352. 352. 352. 352. 352. 352. 352. 352. 352. 352. 352. 352. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 353. 608. 608. 608. 612. 612. 614. 614. 614. 614. 614. 614. 614. 614. 614. 614. 622. 622. 622. 622. 622. 622. 622. 622. 622. 622. 622. 622. 622. 622. 622. 622. 626. 626. 626. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 630. 630. 630. 630. 630. 630. 633. 633. 634. 634. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 635. 636. 636. 636. 637. 637. 642. 642. 642. 642. 642. 642. 642. 642. 642. 642. 642. 643. 643. 643. 643. 643. 643. 643. 643. 643. 644. 644. 644. 644. 644. 644. 644. 644. 644. 644. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 645. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 647. 651. 653. 653. 653. 653. 653. 654. 654. 654. 654. 654. 654. 654. 654. 654. 654. 654. 654. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 658. 658. 658. 658. 658. 658. 658. 658. 658. 658. 658. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 661. 664. 664. 664. 667. 667. 667. 667. 668. 668. 668. 668. 668. 668. 677. 677. 677. 677. 677. 677. 677. 677. 677. 677. 677. 677. 677. 677. 677. 677. 683. 946. 946. 946. 946. 947. 947. 966. 966. 966. 972. 972. 973. 973. 975. 975. 975. 977. 977. 977. 977. 977. 977. 989. 989. 989. 989. 993. 993. 993. 994. 994. 994. 994. 995. 995. 995. 996. 999.1000.1000.1000.1000.1000.1000.1000.1000.1001.1001.1001.1001.1001.1003.1003.1003.1003.1003.1003.1007.1007.1007.1009.1009.1009.1009.1010.1010.1010.1011.1011.1011.1011.1011.1011.1011.1011.1011.1011.1011.1011.1011.1011.1011.1011.1015.1016.1106.1106.1106.1106.1106.1202.1202.1202.1202.1202.1202.1202.1202.1204.1207.1207.1207.1207.1207.1207.1207.1207.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1209.1209.1209.1209.1209.1211.1213.1213.1214.1214.1214.1215.1215.1215.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1216.1217.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1218.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1220.1221.1222.1222.1224.1224.1224.1224.1224.1224.1225.1225.1225.1225.1225.1225.1225.1225.1225.1225.1225.1225.1225.1225.1226.1226.1226.1226.1226.1226.1226.1226.1226.1226.1226.1226.1227.1227.1227.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1228.1232.1232.1232.1232.1232.1232.1235.1235.1235.1238.1238.1238.1239.1241.1241.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1243.1266.1266.1266.1266.1266.1266.1266.1266.1266.1266.1266.1266.1266.1290.1292.1292.1292.1292.1294.1298.1298.1343.1343.1343.1343.1354.1354.1359.1359.1359.1359.1359.1359.1359.1360.1360.1360.1361.1361.1361.1361.1361.1363.1363.1363.1363.1364.1364.1364.1364.1364.1364.1364.1364.1364.1364.1364.1364.1364.1365.1369.1369.1369.1372.1372.1372.1372.1372.1372.1372.1372.1372.1372.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1373.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1374.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1378.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1380.1393.1393.1393.1393.1394.1394.1394.1394.1394.1394.1394.1394.1394.1394.1394.1394.1394.1394.1394.1394.1394.1401.1402.1407.1407.1407.1419.1419.1419.1419.1419.1526.1526.1526.1526.1526.1526.1526.1526.1526.1526.1526.1526.1526.1526.1526.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1534.1538.1539.1542.1543.1543.1543.1543.1543.1543.1543.1543.1543.1543.1543.1544.1544.1544.1544.1544.1544.1544.1544.1544.1544.1544.1544.1544.1544.1544.1544.1545.1546.1546.1546.1546.1546.1546.1547.1547.1549.1549.1549.1549.1549.1549.1549.1552.1552.1552.1552.1552.1552.1552.1552.1552.1552.1552.1553.1553.1553.1553.1554.1554.1556.1556.1556.1557.1557.1559.1559.1559.1559.1559.1559.1559.1559.1563.1563.1563.1563.1565.1567.1567.1567.1567.1567.1567.1567.1567.1567.1569.1570.1570.1570.1570.1570.1570.1570.1570.1570.1572.1572.1572.1574.1576.1578.1578.1578.1578.1580.1580.1580.1583.1583.1583.1583.1583.1584.1590.1592.1593.1593.1593.1593.1593.1593.1593.1593.1593.1593.1593.1594.1594.1594.1594.1612.1614.1614.1614.1614.1614.1614.1614.1614.1614.1615.1615.1615.1615.1615.1615.1615.1615.1616.1616.1616.1616.1616.1617.1617.1617.1618.1619.1620.1620.1630.1630.1630.1630.1630.1630.1630.1630.1630.1636.1636.1636.1640.1640.1640.1640.1640.1640.1640.1640.1640.1651.1651.1651.1651.1654.1654.1658.1658.1658.1658.1659.1659.1659.1659.1659.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 19m12.800s user 17m18.305s sys 0m0.131s Heavy solvent excluded grid being made FORTRAN STOP real 24m44.713s user 24m43.841s sys 0m0.090s