Creating binding-site residue list Creating molecular surface real 0m1.497s user 0m0.230s sys 0m0.138s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1314 spheres. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 4. 4. 4. 14. 14. 14. 14. 14. 14. 14. 14. 14. 14. 14. 169. 169. 169. 169. 169. 169. 169. 169. 169. 169. 169. 169. 171. 171. 171. 171. 171. 171. 172. 172. 174. 174. 174. 178. 178. 178. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 181. 185. 185. 185. 188. 188. 188. 188. 190. 285. 290. 290. 290. 290. 291. 291. 291. 291. 291. 291. 291. 291. 291. 291. 291. 291. 292. 292. 292. 292. 292. 292. 292. 292. 293. 293. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 295. 295. 296. 296. 299. 299. 299. 299. 299. 300. 300. 300. 300. 305. 305. 305. 306. 306. 306. 306. 306. 306. 306. 306. 311. 311. 311. 311. 311. 311. 311. 311. 311. 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992.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1084.1086.1191.1191.1191.1191.1191.1191.1192.1192.1192.1192.1192.1192.1194.1194.1194.1194.1194.1194.1194.1195.1195.1195.1195.1195.1195.1195.1195.1195.1196.1198.1198.1198.1200.1200.1201.1201.1201.1201.1201.1201.1201.1201.1202.1202.1202.1202.1202.1202.1202.1202.1202.1202.1202.1202.1203.1203.1203.1203.1205.1207.1207.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1209.1209.1210.1210.1210.1210.1210.1210.1210.1211.1211.1211.1211.1211.1211.1211.1211.1211.1211.1212.1212.1212.1212.1212.1214.1215.1215.1215.1217.1217.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1219.1253.1253.1253.1253.1253.1253.1253.1253.1265.1276.1276.1276.1289.1289.1293.1310.1311.1311.1311.1311.1311.1311.1311.1324.1326.1334.1334.1337.1337.1337.1338.1338.1338.1340.1340.1340.1340.1340.1340.1342.1342.1342.1342.1342.1343.1343.1343.1343.1343.1343.1343.1343.1343.1343.1345.1345.1347.1347.1347.1347.1347.1347.1347.1348.1348.1348.1348.1348.1348.1348.1348.1348.1348.1348.1348.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1351.1352.1352.1352.1352.1352.1352.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1353.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1354.1355.1355.1355.1355.1355.1355.1355.1355.1355.1355.1355.1355.1355.1355.1355.1355.1355.1357.1357.1357.1357.1357.1357.1357.1357.1357.1357.1359.1359.1373.1377.1377.1377.1377.1377.1377.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1505.1513.1513.1513.1513.1513.1513.1513.1513.1517.1517.1517.1517.1518.1518.1521.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.1522.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1523.1524.1524.1524.1524.1524.1525.1525.1525.1525.1525.1525.1525.1525.1525.1525.1525.1525.1525.1527.1531.1533.1533.1533.1533.1533.1533.1533.1534.1537.1538.1538.1538.1538.1538.1538.1538.1538.1538.1538.1538.1538.1538.1542.1543.1544.1545.1545.1546.1546.1546.1546.1546.1546.1547.1547.1547.1547.1547.1547.1547.1549.1549.1549.1549.1549.1549.1549.1549.1549.1549.1549.1549.1549.1549.1549.1550.1550.1550.1550.1550.1550.1551.1551.1551.1551.1551.1551.1556.1556.1556.1557.1557.1557.1557.1561.1561.1561.1561.1561.1561.1562.1562.1563.1563.1564.1564.1564.1569.1569.1569.1569.1569.1573.1573.1573.1574.1574.1574.1574.1575.1575.1575.1575.1575.1575.1575.1575.1576.1576.1576.1576.1576.1583.1585.1585.1585.1585.1585.1587.1587.1587.1587.1587.1587.1587.1587.1587.1587.1587.1587.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1589.1591.1594.1595.1595.1599.1601.1601.1603.1603.1609.1609.1609.1612.1623.1626.1626.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 17m12.254s user 14m52.991s sys 0m0.121s Heavy solvent excluded grid being made FORTRAN STOP real 34m9.467s user 21m7.279s sys 0m0.095s