There are 40 ligand heavy atoms
Ligand center of coords (x y z): 10.397175 41.86925 31.866675
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 13627
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9932
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9932
Number of spheres polar: 6802, nonpolar: 2241, out of current total: 9932
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.21600 22.39080 29.87020 53.86340 19.86980 43.86320
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1173
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 687
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 680
Spheres center of coords (x y z): 9.14831147058823 43.95527 31.4820426470589
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 8.62790065324334
Final number of output spheres is: 120
Number of polar spheres: 66
Number of nonpolar spheres: 44
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 40