usefragsph not on
There are 36 ligand heavy atoms
Ligand center of coords (x y z): 4.56938888888889 7.66691666666667 17.5428055555556
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1599
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 586
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 586
Number of spheres polar: 182, nonpolar: 282, out of current total: 586
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.42721 10.87946 -2.32069 17.45860 7.65084 27.51600
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 232
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 185
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 118
Spheres center of coords (x y z): 4.45224262711864 8.36214211864407 17.6785855084746
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 2.29490816705034
Final number of output spheres is: 45
Number of polar spheres: 4
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 36