Creating binding-site residue list Creating molecular surface real 0m1.334s user 0m0.230s sys 0m0.096s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1367 spheres. 46. 46. 46. 50. 52. 52. 52. 56. 56. 57. 57. 57. 57. 57. 57. 57. 57. 57. 57. 57. 57. 58. 58. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 59. 60. 60. 60. 66. 66. 66. 66. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 67. 68. 68. 68. 68. 68. 68. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 69. 73. 73. 73. 73. 73. 73. 73. 73. 73. 73. 73. 73. 73. 73. 73. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 76. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 77. 83. 83. 83. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 97. 101. 104. 104. 104. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 442. 444. 444. 444. 444. 444. 446. 449. 449. 449. 451. 451. 451. 451. 451. 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505. 505. 505. 505. 505. 629. 629. 629. 629. 629. 629. 629. 629. 630. 631. 631. 645. 645. 645. 645. 645. 646. 646. 646. 646. 646. 646. 646. 646. 647. 647. 647. 651. 651. 651. 651. 651. 652. 652. 652. 654. 654. 655. 657. 657. 657. 658. 658. 658. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 661. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 662. 690. 690. 690. 690. 690. 690. 690. 690. 690. 690. 690. 690. 691. 691. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 736. 736. 736. 736. 736. 736. 736. 737. 737. 769. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 780. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 785. 785. 785. 785. 794. 794. 794. 794. 794. 794. 794. 794. 794. 794. 797. 797. 803. 803. 810. 810. 810. 810. 810. 810. 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STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 18m39.542s user 17m30.616s sys 0m0.284s Heavy solvent excluded grid being made FORTRAN STOP real 25m5.182s user 24m56.528s sys 0m0.091s