Creating binding-site residue list Creating molecular surface real 0m1.380s user 0m0.236s sys 0m0.129s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1332 spheres. 57. 57. 57. 57. 57. 57. 57. 57. 57. 57. 58. 58. 58. 58. 59. 72. 72. 72. 72. 72. 72. 72. 72. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 74. 75. 75. 75. 75. 75. 75. 75. 75. 75. 75. 75. 76. 76. 76. 76. 76. 93. 95. 95. 95. 95. 95. 95. 96. 96. 96. 96. 96. 96. 96. 96. 96. 96. 96. 96. 97. 614. 614. 614. 614. 614. 614. 614. 617. 617. 617. 617. 617. 617. 617. 617. 618. 618. 620. 620. 620. 620. 620. 620. 621. 624. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 625. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 627. 629. 629. 629. 629. 629. 629. 629. 629. 629. 629. 630. 630. 630. 630. 633. 633. 633. 633. 639. 639. 639. 640. 642. 642. 646. 647. 647. 648. 649. 649. 649. 650. 650. 650. 650. 650. 650. 650. 650. 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993.1021.1021.1021.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1022.1023.1026.1026.1026.1026.1026.1026.1026.1027.1027.1027.1027.1027.1027.1027.1027.1027.1027.1027.1027.1029.1029.1029.1030.1030.1030.1030.1030.1030.1030.1030.1030.1030.1030.1030.1030.1032.1032.1032.1034.1034.1034.1034.1034.1034.1034.1034.1034.1034.1035.1035.1035.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1037.1038.1040.1040.1042.1042.1042.1042.1042.1042.1042.1042.1042.1042.1044.1047.1047.1047.1049.1049.1049.1049.1049.1049.1049.1049.1049.1049.1049.1049.1049.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1051.1054.1054.1054.1054.1056.1056.1056.1056.1056.1056.1056.1056.1056.1056.1056.1056.1056.1056.1056.1056.1058.1058.1058.1061.1061.1061.1061.1061.1061.1061.1061.1061.1062.1062.1062.1062.1062.1062.1069.1069.1069.1069.1069.1069.1069.1069.1069.1069.1074.1074.1076.1076.1076.1082.1082.1082.1083.1089.1089.1089.1089.1089.1089.1089.1089.1090.1091.1091.1091.1272.1272.1276.1276.1276.1283.1286.1286.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1295.1300.1300.1300.1300.1300.1300.1300.1302.1302.1306.1306.1306.1306.1306.1306.1307.1307.1307.1307.1307.1307.1312.1312.1312.1312.1312.1313.1313.1313.1313.1316.1316.1316.1316.1316.1318.1318.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1320.1320.1320.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1322.1322.1322.1322.1322.1322.1322.1322.1322.1322.1322.1324.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1332.1333.1333.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1334.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1335.1340.1340.1340.1340.1340.1340.1340.1341.1341.1341.1343.1343.1343.1346.1352.1352.1353.1354.1354.1354.1354.1354.1354.1354.1354.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1360.1360.1373.1373.1373.1373.1373.1373.1374.1374.1374.1374.1374.1374.1374.1374.1374.1380.1381.1381.1381.1381.1381.1381.1381.1382.1382.1382.1382.1382.1397.1400.1400.1400.1400.1400.1400.1400.1400.1400.1400.1400.1400.1400.1400.1400.1400.1401.1401.1401.1401.1401.1401.1401.1401.1401.1401.1401.1401.1401.1401.1401.1402.1402.1403.1403.1404.1411.1411.1411.1411.1411.1411.1412.1412.1412.1412.1415.1415.1415.1415.1415.1415.1415.1415.1415.1415.1415.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1418.1421.1422.1422.1423.1423.1423.1423.1424.1424.1424.1424.1424.1424.1424.1424.1425.1426.1426.1426.1426.1426.1426.1426.1426.1426.1426.1426.1426.1426.1426.1426.1426.1427.1427.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1433.1435.1435.1435.1435.1435.1435.1435.1435.1435.1435.1435.1435.1440.1440.1440.1440.1440.1440.1440.1440.1440.1442.1442.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1443.1444.1444.1444.1444.1444.1444.1444.1444.1444.1448.1448.1448.1449.1450.1450.1450.1451.1451.1451.1451.1451.1451.1451.1452.1452.1452.1452.1452.1452.1452.1452.1452.1452.1452.1452.1452.1454.1456.1457.1457.1457.1457.1457.1457.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1464.1464.1464.1465.1465.1468.1468.1469.1469.1494.1494.1494.1495.1495.1495.1495.1495.1495.1495.1495.1495.1495.1495.1496.1496.1496.1496.1496.1496.1496.1814.1814.1814.1815.1815.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1818.1822.1822.1822.1823.1823.1823.1823.1823.1823.1824.1824.1824.1824.1824.1825.1827.1827.1827.1827.1827.1827.1827.1831.1831.1831.1831.1831.1831.1833.1833.1833.1833.1833.1833.1833.1833.1833.1833.1833.1833.1833.1833.1833.1834.1834.1834.1834.1834.1834.1834.1834.1836.1836.1836.1836.1836.1836.1836.1836.1838.1838.1838.1838.1839.1839.1839.1839.1844.1846.1846.1846.1846.1846.1846.1846.1846.1846.1846.1846.1847.1847.1847.1847.1847.1850.1850.1850.1850.1851.1851.1851.1851.1851.1851.1851.1852.1852.1852.1852.1852.1852.1852.1852.1852.1852.1853.1853.1853.1853.1855.1857.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 15m57.933s user 15m34.082s sys 0m0.085s Heavy solvent excluded grid being made FORTRAN STOP real 22m33.711s user 22m21.307s sys 0m0.034s