There are 22 ligand heavy atoms Ligand center of coords (x y z): 9.468 32.4635909090909 60.6505 useligsph not on Starting number of spheres from sph/sph cluster 0: 1332 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 995 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 995 Number of spheres polar: 294, nonpolar: 469, out of current total: 995 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.51972 21.46535 20.59848 44.18175 51.77540 72.63300 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 367 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 280 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 9.468 32.4635909090909 60.6505 Center point: 117 xyz: 9.39891 33.07330 60.88895 After continuity checking, number of spheres is: 200 Spheres center of coords (x y z): 7.7047913 30.1157566 61.7311902 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 4.10280347593584 35.9453422459893 53.4433622994653 Average weighted-distance for final elimination is: 30.6152440964818 Final number of output spheres is: 120 Number of polar spheres: 33 Number of nonpolar spheres: 47 Number of spheres that are near neither polar nor nonpolar receptor atoms: 40 Final number of spheres that are from crystallographic ligand: 0