Creating binding-site residue list Creating molecular surface real 0m3.107s user 0m0.182s sys 0m0.098s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1083 spheres. 1. 1. 1. 1. 1. 1. 2. 2. 2. 2. 2. 2. 2. 4. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 5. 9. 11. 12. 12. 13. 13. 13. 20. 20. 20. 20. 20. 20. 20. 35. 35. 35. 35. 35. 35. 35. 35. 35. 35. 35. 35. 35. 52. 201. 201. 201. 204. 209. 210. 217. 217. 217. 217. 217. 217. 217. 217. 217. 223. 223. 223. 223. 223. 223. 223. 223. 225. 225. 225. 225. 225. 225. 225. 225. 225. 234. 234. 234. 234. 234. 235. 235. 235. 235. 235. 235. 235. 235. 235. 235. 235. 235. 235. 235. 235. 241. 241. 241. 241. 241. 241. 241. 241. 241. 241. 241. 241. 241. 241. 242. 242. 242. 242. 242. 242. 242. 242. 242. 245. 250. 250. 250. 250. 250. 250. 250. 250. 250. 250. 252. 255. 255. 256. 256. 256. 256. 256. 257. 257. 257. 258. 258. 258. 258. 259. 259. 259. 259. 259. 261. 263. 263. 263. 263. 263. 263. 263. 265. 266. 267. 267. 267. 267. 267. 267. 267. 267. 268. 268. 268. 268. 268. 272. 272. 274. 275. 275. 275. 280. 280. 281. 281. 281. 281. 281. 281. 282. 282. 289. 289. 291. 291. 291. 291. 291. 291. 291. 291. 291. 291. 291. 291. 292. 292. 292. 292. 292. 292. 292. 292. 292. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 294. 304. 304. 304. 304. 304. 304. 304. 304. 304. 304. 307. 309. 309. 309. 309. 309. 309. 309. 309. 309. 309. 309. 309. 309. 309. 309. 309. 309. 310. 310. 311. 311. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 312. 318. 318. 318. 318. 318. 318. 318. 318. 318. 318. 318. 318. 318. 318. 320. 320. 320. 320. 827. 827. 827. 827. 830. 834. 834. 834. 834. 834. 834. 834. 835. 835. 835. 835. 835. 835. 835. 836. 839. 840. 840. 840. 840. 841. 841. 842. 842. 842. 842. 842. 842. 842. 842. 842. 843. 843. 843. 843. 843. 843. 843. 843. 843. 843. 843. 843. 843. 843. 843. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 844. 850. 850. 851. 851. 851. 851. 851. 851. 851. 851. 851. 865. 865. 865. 866. 866. 866. 866. 867. 867. 867. 867. 867. 867. 867. 867. 867. 867. 867. 867. 867. 986. 986. 986. 986. 986. 987. 987. 987. 987. 987. 987. 987. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 988. 989. 990. 990. 990. 990. 990. 991. 991. 991. 991. 991. 991. 991. 992. 992. 992. 992. 992. 992. 992. 992. 992. 992. 996.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1006.1006.1006.1006.1006.1006.1006.1006.1006.1006.1006.1007.1008.1008.1008.1008.1008.1008.1008.1008.1008.1008.1008.1008.1018.1018.1019.1019.1019.1019.1019.1019.1019.1019.1019.1019.1019.1024.1024.1024.1024.1025.1025.1025.1025.1026.1027.1028.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1029.1030.1030.1030.1030.1030.1030.1030.1030.1030.1030.1031.1031.1031.1031.1031.1031.1031.1031.1031.1031.1045.1047.1047.1047.1047.1047.1047.1197.1197.1197.1197.1197.1197.1197.1197.1197.1197.1197.1197.1197.1197.1197.1197.1198.1198.1203.1205.1205.1205.1205.1205.1205.1205.1205.1205.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1208.1233.1233.1234.1234.1234.1235.1235.1235.1235.1235.1235.1235.1235.1235.1246.1250.1250.1250.1252.1255.1258.1259.1260.1260.1261.1262.1262.1262.1262.1262.1262.1268.1269.1269.1269.1269.1269.1269.1269.1269.1269.1269.1269.1273.1273.1274.1274.1274.1274.1274.1274.1278.1278.1278.1278.1278.1278.1278.1278.1278.1278.1278.1278.1278.1278.1278.1278.1318.1318.1318.1318.1318.1318.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1341.1341.1341.1341.1342.1342.1342.1342.1342.1347.1347.1347.1347.1347.1347.1347.1348.1356.1356.1356.1356.1356.1356.1357.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1358.1359.1359.1365.1365.1365.1365.1365.1365.1365.1366.1366.1366.1366.1366.1366.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1371.1374.1374.1374.1374.1375.1375.1375.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1376.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1379.1383.1383.1385.1385.1386.1386.1386.1387.1387.1387.1387.1388.1388.1388.1390.1393.1395.1395.1395.1395.1395.1396.1396.1397.1397.1397.1397.1397.1401.1401.1401.1401.1401.1401.1401.1401.1401.1402.1402.1402.1402.1402.1402.1404.1404.1404.1404.1404.1404.1404.1404.1404.1404.1404.1404.1404.1404.1404.1404.1405.1405.1405.1405.1405.1405.1405.1405.1405.1405.1405.1405.1405.1405.1405.1405.1405.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1406.1409.1409.1409.1409.1409.1409.1409.1409.1409.1410.1410.1410.1410.1410.1410.1412.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1413.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 18m48.357s user 16m4.147s sys 0m0.182s Heavy solvent excluded grid being made FORTRAN STOP real 30m39.593s user 23m46.899s sys 0m0.225s