There are 33 ligand heavy atoms
Ligand center of coords (x y z): 114.671 66.1135151515152 10.5548181818182
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 13301
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9043
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9043
Number of spheres polar: 4536, nonpolar: 3463, out of current total: 9043
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 102.67640 126.66560 54.11740 78.09980 -1.44240 22.54860
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1069
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 627
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 593
Spheres center of coords (x y z): 113.113064755481 66.5045325463744 14.1996492411467
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 9.04082395580545
Final number of output spheres is: 120
Number of polar spheres: 70
Number of nonpolar spheres: 44
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 33