Creating binding-site residue list Creating molecular surface real 0m1.432s user 0m0.237s sys 0m0.138s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1426 spheres. 89. 89. 89. 89. 89. 89. 89. 89. 92. 92. 92. 92. 92. 92. 93. 93. 93. 93. 93. 93. 93. 93. 93. 93. 93. 93. 93. 94. 94. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 95. 96. 96. 99. 100. 100. 100. 101. 101. 101. 101. 101. 101. 101. 101. 101. 101. 101. 101. 107. 107. 107. 107. 107. 107. 110. 111. 111. 114. 114. 114. 114. 114. 114. 191. 191. 191. 191. 191. 191. 191. 191. 191. 191. 191. 191. 191. 191. 191. 196. 196. 196. 196. 196. 196. 196. 196. 196. 196. 198. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 201. 202. 203. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 214. 217. 217. 217. 217. 219. 219. 219. 219. 219. 219. 220. 220. 220. 220. 220. 223. 224. 224. 224. 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294. 294. 294. 294. 294. 294. 294. 295. 302. 302. 302. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 303. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 327. 528. 531. 531. 531. 531. 546. 546. 546. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 553. 554. 554. 554. 554. 554. 554. 554. 554. 554. 554. 554. 554. 559. 559. 559. 559. 560. 560. 560. 563. 563. 563. 565. 565. 565. 565. 565. 565. 565. 565. 565. 567. 570. 570. 570. 570. 570. 570. 570. 570. 571. 572. 572. 573. 573. 573. 573. 573. 573. 573. 573. 573. 573. 573. 577. 579. 579. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 596. 601. 604. 604. 610. 610. 610. 610. 610. 610. 617. 617. 617. 617. 617. 617. 617. 617. 617. 617. 617. 617. 617. 617. 617. 617. 617. 619. 619. 619. 619. 619. 619. 619. 619. 619. 630. 630. 630. 631. 633. 633. 633. 633. 633. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 634. 635. 635. 635. 635. 714. 719. 719. 733. 733. 733. 733. 733. 737. 737. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 743. 743. 743. 743. 743. 743. 743. 743. 743. 743. 743. 743. 743. 743. 743. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 860. 860. 860. 860. 860. 860. 860. 861. 861. 862. 862. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 865. 865. 865. 865. 865. 866. 866. 866. 866. 870. 870. 870. 870. 870. 870. 871. 871. 871. 871. 871. 871. 871. 871. 871. 871. 871. 871. 876. 876. 876. 876. 876. 876. 876. 876. 878. 878. 878. 880. 887. 887. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 894. 894. 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STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 17m48.105s user 16m18.791s sys 0m0.184s Heavy solvent excluded grid being made FORTRAN STOP real 31m42.129s user 23m11.153s sys 0m0.052s