Creating binding-site residue list Creating molecular surface real 0m1.504s user 0m0.227s sys 0m0.119s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0: 932 spheres. 666. 666. 666. 666. 666. 666. 666. 666. 666. 666. 667. 667. 667. 667. 667. 667. 670. 702. 705. 705. 705. 705. 705. 705. 705. 706. 706. 706. 706. 706. 706. 706. 707. 707. 707. 707. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 709. 709. 710. 710. 710. 710. 710. 710. 710. 710. 710. 710. 710. 710. 710. 711. 711. 711. 711. 711. 711. 711. 711. 712. 712. 712. 712. 712. 712. 712. 712. 712. 712. 714. 714. 714. 714. 714. 719. 719. 719. 719. 719. 720. 720. 720. 720. 720. 720. 725. 725. 731. 737. 737. 737. 737. 738. 738. 738. 738. 759. 760. 760. 760. 760. 761. 762. 762. 762. 762. 764. 764. 764. 764. 764. 764. 764. 764. 765. 766. 766. 766. 766. 766. 766. 766. 766. 767. 767. 767. 773. 773. 773. 773. 773. 773. 773. 773. 773. 773. 773. 773. 773. 773. 773. 773. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 774. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 781. 782. 782. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 783. 784. 785. 785. 789. 789. 789. 789. 789. 789. 789. 789. 789. 789. 791. 793. 793. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 796. 799. 799. 803. 803. 803. 803. 803. 803. 806. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 807. 817. 817. 817. 817. 817. 817. 817. 817. 817. 817. 817. 817. 817. 817. 817. 817. 819. 819. 819. 819. 902. 902. 902. 902. 902. 902. 902. 902. 906. 906. 906. 906. 906. 906. 906. 906. 909. 909. 909. 950. 971.1044.1044.1044.1044.1044.1046.1046.1046.1046.1046.1046.1046.1046.1046.1046.1046.1048.1048.1048.1048.1048.1048.1058.1058.1058.1058.1058.1058.1058.1058.1058.1058.1058.1058.1058.1058.1058.1058.1073.1073.1073.1073.1073.1076.1076.1076.1076.1076.1076.1076.1076.1076.1078.1080.1080.1080.1080.1080.1080.1080.1080.1080.1080.1080.1080.1080.1080.1083.1083.1085.1085.1085.1085.1085.1085.1085.1086.1088.1088.1088.1088.1088.1091.1095.1095.1095.1095.1095.1095.1095.1095.1096.1114.1114.1114.1115.1115.1115.1115.1115.1115.1115.1115.1115.1115.1117.1117.1117.1117.1117.1117.1117.1117.1117.1117.1117.1117.1118.1119.1119.1130.1130.1130.1154.1156.1156.1156.1157.1197.1197.1198.1199.1199.1199.1199.1199.1204.1204.1204.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1212.1212.1212.1212.1212.1241.1241.1241.1242.1242.1242.1246.1246.1246.1247.1247.1251.1251.1251.1251.1251.1251.1251.1251.1251.1251.1252.1252.1252.1252.1252.1252.1253.1253.1253.1253.1253.1257.1258.1258.1258.1258.1258.1262.1262.1262.1262.1262.1262.1262.1264.1264.1267.1267.1267.1267.1267.1267.1267.1267.1267.1267.1267.1267.1267.1283.1287.1288.1289.1292.1292.1293.1293.1293.1293.1293.1293.1293.1293.1293.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1294.1295.1295.1295.1296.1296.1296.1296.1296.1296.1296.1296.1296.1296.1300.1300.1300.1301.1301.1301.1301.1301.1301.1303.1303.1303.1303.1303.1303.1303.1303.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1305.1305.1305.1305.1305.1305.1308.1308.1308.1308.1308.1310.1311.1311.1311.1313.1313.1313.1316.1316.1318.1318.1319.1319.1319.1319.1319.1319.1324.1324.1324.1324.1324.1324.1324.1324.1324.1324.1324.1325.1325.1325.1325.1325.1325.1325.1325.1325.1325.1325.1325.1325.1326.1326.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1328.1328.1328.1329.1329.1329.1329.1329.1341.1341.1341.1341.1346.1346.1346.1346.1346.1346.1346.1346.1346.1346.1346.1346.1347.1348.1348.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1349.1350.1350.1351.1351.1351.1354.1355.1355.1355.1355.1355.1358.1358.1358.1358.1358.1358.1358.1358.1358.1359.1359.1360.1360.1360.1360.1360.1360.1360.1360.1360.1360.1360.1360.1365.1366.1366.1366.1366.1367.1371.1372.1376.1378.1378.1378.1381.1381.1381.1381.1381.1382.1382.1382.1382.1382.1382.1382.1382.1382.1382.1383.1561.1566.1566.1566.1566.1566.1566.1566.1566.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1568.1570.1570.1570.1570.1570.1570.1570.1570.1570.1846.1846.1846.1846.1846.1846.1846.1846.1846.1846.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 16m19.888s user 15m15.800s sys 0m0.088s Heavy solvent excluded grid being made FORTRAN STOP real 22m8.871s user 21m56.326s sys 0m0.087s