Creating binding-site residue list Creating molecular surface real 0m1.864s user 0m0.276s sys 0m0.134s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0: 948 spheres. 149. 149. 177. 177. 177. 177. 177. 177. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 178. 181. 181. 181. 182. 182. 182. 182. 182. 182. 182. 182. 182. 182. 182. 182. 182. 182. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 183. 184. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 185. 351. 351. 351. 351. 357. 357. 357. 358. 358. 358. 362. 362. 362. 362. 363. 363. 363. 363. 363. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 365. 366. 366. 366. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 367. 369. 369. 369. 369. 369. 369. 369. 369. 369. 370. 370. 370. 370. 372. 372. 372. 372. 372. 372. 372. 373. 375. 375. 375. 375. 375. 376. 377. 379. 379. 379. 379. 380. 380. 381. 381. 383. 383. 384. 384. 384. 384. 384. 385. 385. 385. 385. 385. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 386. 387. 387. 387. 387. 387. 389. 389. 389. 389. 389. 389. 389. 389. 389. 389. 389. 389. 389. 389. 389. 389. 393. 393. 393. 393. 393. 394. 394. 395. 395. 395. 395. 395. 395. 395. 395. 396. 396. 396. 396. 396. 396. 396. 396. 396. 401. 401. 401. 401. 401. 401. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 402. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 665. 669. 669. 669. 669. 669. 669. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 868. 874. 874. 874. 875. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 888. 889. 890. 890. 890. 890. 890. 890. 890. 890. 890. 890. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 891. 903. 903. 903. 903. 904. 904. 904. 905. 905. 905. 905. 906. 906. 911. 913. 915. 916. 916. 916. 916. 916. 916. 916. 917. 919. 920. 920. 920. 920. 921. 921. 921. 921. 921. 922. 922. 922. 922. 922. 922. 922. 922. 922. 923. 923. 923. 923. 923. 923. 923. 923. 923. 924. 924. 924. 930. 930. 930. 933. 933. 933. 933. 933. 933. 933. 933. 933. 933. 933. 933. 934. 934. 934. 937. 937. 937. 938. 938. 938. 938. 939. 939. 939. 939. 939. 940. 941. 941. 941. 941. 941. 941. 941. 941. 941. 941. 941. 942. 942. 942. 942. 942. 942. 949. 949. 949. 949. 949. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 950. 951. 951. 951. 951. 951. 951. 951. 954. 954. 954. 954. 955. 955. 955. 955. 955. 955. 955. 955. 955. 955. 955.1274.1274.1274.1274.1274.1274.1274.1276.1276.1276.1276.1276.1276.1276.1277.1277.1289.1289.1289.1289.1289.1289.1289.1289.1289.1289.1289.1289.1289.1289.1289.1289.1289.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1292.1293.1293.1293.1293.1293.1293.1293.1293.1293.1293.1293.1293.1293.1293.1293.1293.1293.1298.1298.1299.1299.1302.1302.1303.1303.1303.1303.1303.1304.1304.1304.1306.1306.1307.1307.1307.1307.1307.1307.1309.1310.1310.1310.1311.1311.1311.1311.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1312.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1313.1315.1315.1315.1316.1318.1323.1323.1323.1323.1323.1324.1324.1324.1324.1545.1545.1545.1545.1545.1545.1545.1545.1550.1550.1550.1550.1550.1550.1550.1550.1550.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1556.1568.1568.1568.1568.1569.1569.1570.1570.1570.1570.1570.1570.1570.1570.1578.1578.1580.1580.1580.1583.1583.1768.1769.1771.1771.1774.1774.1774.1774.1774.1774.1774.1774.1774.1774.1774.1774.1808.1808.1808.1808.1808.1808.1808.1811.1811.1811.1811.1811.1811.1811.1811.1811.1812.1812.1813.1813.1813.1813.1813.1813.1813.1813.1813.1813.1813.1814.1814.1814.1814.1814.1814.1814.1814.1814.1814.1814.1814.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1816.1838.1838.1838.1838.1838.1838.1838.1839.1839.1840.1840.1840.1840.1841.1841.1841.1841.1842.1842.1842.1842.1842.1842.1842.1842.1842.1842.1842.1842.1842.1843.1843.1843.1843.1843.1843.1843.1843.1843.1843.1843.1843.1843.1843.1849.1849.1849.1849.1849.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 27m21.595s user 23m56.889s sys 0m0.038s Heavy solvent excluded grid being made FORTRAN STOP real 36m13.242s user 34m2.762s sys 0m0.033s