Creating binding-site residue list Creating molecular surface real 0m1.688s user 0m0.283s sys 0m0.155s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1265 spheres. 213. 213. 213. 213. 213. 213. 213. 213. 213. 213. 215. 215. 215. 215. 215. 215. 215. 215. 215. 215. 222. 222. 222. 222. 222. 222. 222. 222. 222. 222. 222. 226. 226. 226. 226. 226. 226. 226. 226. 226. 226. 226. 230. 232. 232. 232. 232. 232. 232. 232. 232. 232. 232. 232. 232. 232. 237. 237. 237. 238. 238. 238. 238. 238. 238. 238. 238. 238. 238. 238. 238. 238. 238. 239. 239. 239. 239. 240. 240. 240. 240. 240. 240. 241. 241. 241. 241. 241. 241. 242. 242. 242. 242. 242. 242. 242. 244. 244. 244. 244. 244. 244. 244. 244. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 247. 250. 253. 253. 253. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 254. 255. 257. 259. 262. 262. 262. 262. 262. 262. 262. 262. 262. 262. 262. 262. 263. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 264. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 265. 267. 267. 267. 267. 267. 267. 267. 268. 268. 268. 268. 268. 268. 268. 268. 268. 268. 275. 275. 275. 275. 276. 276. 276. 276. 276. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 278. 283. 284. 284. 284. 284. 284. 284. 284. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 285. 294. 294. 294. 308. 308. 376. 376. 376. 376. 376. 376. 377. 377. 378. 388. 388. 389. 389. 391. 391. 391. 391. 391. 391. 391. 391. 396. 396. 396. 396. 396. 396. 396. 404. 404. 404. 404. 404. 410. 411. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 412. 413. 413. 413. 413. 413. 413. 413. 418. 418. 418. 418. 421. 421. 421. 421. 421. 421. 421. 421. 421. 421. 421. 429. 429. 429. 526. 526. 526. 526. 526. 526. 526. 527. 527. 527. 527. 528. 528. 528. 528. 528. 528. 528. 528. 528. 528. 529. 529. 529. 529. 529. 530. 530. 530. 530. 530. 530. 530. 530. 530. 530. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 606. 610. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 670. 671. 671. 671. 671. 671. 672. 672. 673. 673. 673. 673. 673. 673. 673. 673. 673. 673. 673. 673. 673. 673. 679. 679. 679. 679. 682. 685. 686. 686. 686. 686. 686. 686. 686. 686. 686. 686. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 689. 689. 689. 689. 689. 689. 689. 689. 689. 689. 693. 693. 693. 693. 693. 693. 693. 699. 699. 705. 705. 705. 705. 705. 705. 705. 707. 707. 707. 707. 707. 708. 708. 708. 708. 708. 826. 826. 826. 826. 826. 826. 826. 826. 826. 826. 827. 827. 827. 827. 827. 827. 827. 827. 827. 827. 827. 827. 827. 827. 829. 829. 831. 832. 832. 834. 834. 834. 834. 834. 834. 834. 835. 835. 835. 836. 836. 836. 836. 836. 836. 836. 836. 840. 841. 841. 844. 844. 844. 844. 846. 849. 849. 853. 853. 853. 853. 854. 854. 860. 860. 861. 861. 861. 861. 861. 861. 862. 862. 862. 862. 862. 862. 865. 867. 867. 867. 872. 875. 875. 875. 875. 875. 875. 875. 875. 875. 875. 875. 875. 875. 875. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 877. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 878. 879. 889. 889. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893. 893.1170.1184.1188.1189.1189.1190.1190.1191.1194.1194.1194.1194.1194.1194.1197.1197.1197.1197.1197.1205.1205.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1206.1212.1212.1212.1212.1212.1212.1217.1217.1217.1217.1217.1218.1218.1218.1218.1218.1218.1218.1218.1219.1219.1219.1219.1220.1220.1220.1220.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1221.1223.1228.1228.1243.1244.1244.1244.1244.1244.1244.1244.1245.1245.1245.1245.1245.1245.1245.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1252.1258.1258.1258.1258.1258.1258.1307.1307.1307.1307.1307.1307.1307.1307.1307.1314.1314.1314.1314.1314.1314.1314.1314.1314.1314.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1320.1321.1322.1322.1323.1324.1325.1325.1325.1325.1325.1326.1326.1326.1326.1326.1326.1326.1326.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1327.1328.1328.1330.1340.1341.1345.1345.1345.1345.1349.1349.1349.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1350.1454.1454.1454.1454.1454.1455.1455.1455.1455.1456.1456.1456.1456.1456.1456.1456.1456.1456.1456.1456.1456.1456.1456.1456.1456.1457.1457.1457.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.1463.2246.2247.2247.2247.2247.2247.2247.2247.2247.2247.2247.2248.2249.2249.2249.2250.2250.2250.2250.2250.2251.2251.2253.2253.2253.2254.2254.2256.2256.2256.2256.2258.2258.2258.2267.2267.2267.2267.2267.2267.2270.2270.2270.2272.2272.2273.2273.2273.2273.2273.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2274.2276.2276.2276.2277.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2278.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2281.2283.2283.2283.2283.2283.2283.2283.2283.2283.2283.2283.2283.2283.2286.2286.2289.2289.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2290.2291.2291.2291.2291.2291.2291.2291.2291.2291.2291.2292.2292.2292.2292.2292.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2293.2305.2305.2305.2307.2307.2307.2307.2307.2308.2308.2308.2308.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.2309.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 17m11.830s user 15m23.592s sys 0m0.098s Heavy solvent excluded grid being made FORTRAN STOP real 22m0.596s user 21m39.739s sys 0m0.075s