Creating binding-site residue list Creating molecular surface real 0m2.204s user 0m0.343s sys 0m0.206s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1064 spheres. 1. 14. 14. 14. 14. 14. 229. 229. 229. 229. 229. 229. 229. 229. 229. 229. 229. 229. 231. 231. 231. 231. 231. 231. 231. 231. 232. 232. 232. 232. 232. 232. 232. 232. 232. 232. 232. 232. 238. 244. 244. 244. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 246. 350. 350. 350. 350. 351. 351. 351. 351. 351. 351. 351. 351. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 354. 355. 358. 358. 359. 360. 691. 691. 691. 691. 694. 694. 696. 696. 697. 700. 700. 700. 701. 701. 701. 701. 705. 705. 706. 708. 708. 708. 709. 710. 710. 710. 710. 710. 710. 710. 710. 714. 716. 716. 717. 717. 717. 717. 717. 717. 717. 717. 717. 718. 718. 718. 718. 718. 728. 728. 728. 732. 732. 732. 732. 732. 951. 951. 983. 984. 985. 985. 985. 985. 985. 985. 985. 985. 985. 985. 985. 985. 985. 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993.1006.1007.1007.1007.1007.1007.1007.1007.1008.1010.1012.1012.1012.1013.1014.1015.1016.1017.1017.1018.1018.1018.1018.1018.1018.1018.1019.1019.1019.1019.1019.1022.1022.1022.1022.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1023.1024.1024.1024.1024.1024.1024.1024.1024.1024.1119.1124.1124.1136.1136.1136.1136.1136.1264.1264.1264.1264.1264.1264.1265.1265.1265.1265.1265.1279.1279.1279.1281.1281.1281.1281.1281.1281.1281.1281.1281.1281.1281.1324.1324.1324.1324.1326.1328.1328.1328.1328.1344.1345.1345.1345.1346.1346.1346.1346.1346.1346.1347.1347.1347.1347.1347.1347.1347.1347.1347.1347.1347.1347.1347.1347.1347.1370.1370.1370.1370.1370.1370.1370.1370.1370.1370.1370.1370.1370.1370.1372.1372.1372.1372.1372.1372.1378.1381.1395.1395.1395.1395.1395.1395.1395.1397.1397.1397.1397.1397.1397.1400.1400.1400.1400.1400.1401.1401.1401.1407.1407.1407.1407.1407.1407.1407.1409.1409.1409.1410.1410.1410.1410.1410.1410.1410.1430.1430.1430.1430.1430.1430.1430.1431.1431.1431.1440.1440.1440.1443.1444.1444.1446.1446.1446.1446.1446.1448.1448.1448.1448.1448.1449.1449.1449.1449.1449.1449.1449.1449.1454.1454.1454.1454.1454.1457.1457.1457.1457.1457.1457.1457.1457.1457.1457.1457.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1458.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1459.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1460.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1461.1462.1462.1463.1463.1463.1463.1463.1465.1465.1465.1465.1467.1478.1478.1478.1478.1479.1479.1479.1479.1479.1479.1479.1479.1479.1479.1483.1483.1483.1483.1483.1483.1483.1485.1486.1486.1486.1486.1597.1597.1597.1597.1597.1603.1603.1603.1603.1603.1603.1603.1603.1603.1603.1603.1608.1608.1608.1608.1608.1609.1609.1610.1610.1610.1610.1610.1611.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1612.1613.1613.1613.1613.1613.1613.1613.1613.1613.1613.1613.1613.1613.1613.1614.1614.1615.1615.1615.1615.1615.1617.1617.1625.1626.1626.1626.1626.1628.1628.1628.1628.1628.1628.1628.1628.1631.1632.1633.1633.1633.1633.1634.1634.1634.1634.1634.1634.1634.1634.1634.1634.1634.1634.1634.1635.1635.1635.1635.1635.1635.1635.1636.1636.1636.1636.1636.1636.1636.1636.1636.1636.1636.1637.1637.1637.1639.1639.1639.1639.1639.1639.1639.1639.1639.1639.1639.1639.1639.1639.1639.1641.1641.1641.1641.1641.1641.1641.1641.1647.1647.1647.1647.1647.1647.1651.1651.1652.1652.1656.1656.1657.1657.1658.1658.1659.1660.1660.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1661.1677.1677.1677.1680.1685.1687.1687.1687.1687.1687.1693.1693.1693.1693.1693.1693.1694.1696.1696.1696.1696.1702.1702.1702.1724.1725.1725.1725.1725.2094.2094.2094.2095.2095.2095.2095.2095.2095.2098.2098.2098.2098.2098.2098.2098.2098.2098.2098.2098.2098.2098.2099.2104.2104.2104.2104.2104.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2112.2117.2117.2117.2119.2120.2122.2123.2124.2124.2124.2124.2124.2124.2124.2124.2124.2124.2124.2124.2124.2124.2124.2125.2125.2125.2125.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2129.2130.2130.2130.2130.2130.2130.2130.2130.2130.2130.2130.2130.2130.2130.2130.2131.2131.2131.2132.2132.2132.2132.2132.2132.2141.2142.2142.2143.2143.2143.2143.2143.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2144.2145.2146.2146.2146.2146.2147.2147.2147.2147.2147.2148.2148.2148.2148.2148.2148.2148.2148.2148.2148.2148.2148.2148.2148.2148.2329.2329.2329.2329.2329.2329.2329.2341.2341.2341.2341.2341.2341.2344.2344.2344.2344.2344.2346.2347.2347.2347.2350.2350.2353.2355.2355.2355.2355.2356.2360.2360.2360.2364.2364.2364.2364.2364.2364.2364.2365.2365.2365.2365.2367.2369.2369.2369.2369.2369.2369.2369.2369.2369.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2376.2377.2377.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 16m36.194s user 16m21.440s sys 0m0.099s Heavy solvent excluded grid being made FORTRAN STOP real 23m3.813s user 23m2.322s sys 0m0.143s