xtal-lig.pdb nu -100000 Y all rec.pdb all Y 9.0 rec.site 0 EOI # 'ligand file name'. # nanu (nu) # number of residue numbers to look ahead in filtering # MS run? (N) # atom name/number: all # 'receptor file name'. (spheres file) # internal filtering? (no if nanu=na) # na # -100000 # N # C C # ../systems/systems/2ptn/spheres/junk.pdb # C NOT C