Creating binding-site residue list Creating molecular surface real 0m1.923s user 0m0.380s sys 0m0.131s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1682 spheres. 30. 30. 30. 30. 30. 30. 30. 32. 32. 32. 32. 32. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 33. 181. 181. 181. 181. 181. 186. 187. 187. 187. 187. 187. 188. 188. 188. 188. 188. 188. 188. 188. 188. 188. 188. 188. 188. 188. 188. 189. 189. 189. 189. 189. 189. 189. 193. 194. 194. 194. 194. 194. 195. 195. 195. 195. 195. 195. 195. 195. 195. 195. 195. 195. 195. 196. 196. 196. 200. 200. 200. 200. 200. 200. 200. 200. 201. 203. 203. 203. 203. 203. 203. 203. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 204. 206. 206. 206. 206. 206. 206. 206. 206. 207. 207. 207. 207. 207. 209. 209. 211. 211. 211. 211. 211. 211. 211. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 212. 213. 213. 215. 215. 215. 216. 216. 216. 217. 217. 217. 217. 217. 217. 217. 217. 217. 217. 217. 217. 217. 217. 218. 218. 218. 218. 218. 218. 231. 238. 238. 238. 239. 239. 249. 249. 249. 249. 250. 250. 250. 250. 250. 250. 251. 251. 251. 252. 252. 252. 252. 252. 252. 258. 258. 258. 258. 258. 259. 259. 259. 259. 267. 274. 274. 274. 274. 274. 274. 274. 275. 276. 276. 276. 276. 276. 276. 276. 276. 276. 278. 278. 278. 279. 279. 279. 340. 340. 340. 340. 340. 341. 341. 344. 344. 346. 346. 346. 346. 347. 347. 347. 347. 348. 348. 349. 349. 349. 349. 349. 349. 349. 349. 349. 349. 349. 349. 349. 353. 354. 354. 354. 354. 355. 355. 355. 355. 355. 355. 355. 355. 355. 355. 355. 355. 355. 368. 368. 368. 368. 368. 368. 368. 368. 368. 368. 380. 380. 380. 380. 380. 380. 380. 383. 383. 383. 383. 383. 383. 383. 383. 383. 383. 390. 390. 390. 390. 390. 390. 391. 391. 391. 391. 391. 455. 455. 457. 457. 458. 458. 458. 458. 458. 479. 479. 479. 479. 479. 480. 480. 480. 480. 480. 480. 480. 480. 480. 480. 480. 480. 480. 480. 480. 480. 480. 482. 486. 486. 486. 486. 486. 486. 486. 486. 486. 486. 486. 486. 487. 487. 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540. 540. 540. 540. 540. 540. 540. 540. 540. 540. 540. 540. 540. 540. 544. 547. 550. 550. 550. 550. 550. 550. 550. 550. 550. 550. 550. 551. 551. 551. 551. 551. 551. 551. 551. 551. 551. 551. 551. 551. 551. 551. 551. 551. 552. 552. 552. 552. 552. 552. 552. 552. 552. 552. 552. 552. 563. 563. 563. 571. 571. 571. 571. 571. 572. 585. 585. 585. 585. 585. 585. 585. 585. 585. 585. 585. 585. 585. 585. 585. 587. 587. 587. 587. 588. 588. 588. 588. 588. 588. 588. 593. 594. 594. 594. 594. 594. 594. 594. 599. 599. 599. 600. 600. 600. 600. 600. 601. 601. 601. 601. 601. 602. 604. 604. 604. 604. 607. 609. 609. 609. 609. 609. 609. 609. 609. 609. 611. 611. 611. 614. 614. 614. 614. 614. 614. 614. 615. 615. 615. 615. 615. 615. 615. 615. 615. 615. 615. 622. 622. 622. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 626. 686. 686. 686. 699. 701. 716. 716. 716. 716. 716. 716. 716. 716. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 717. 721. 722. 722. 722. 722. 722. 722. 722. 724. 724. 726. 726. 726. 726. 726. 726. 726. 727. 727. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 730. 734. 736. 736. 736. 736. 736. 736. 736. 737. 737. 737. 737. 737. 737. 737. 737. 738. 738. 738. 741. 741. 741. 741. 741. 741. 744. 747. 747. 747. 747. 747. 747. 747. 747. 748. 748. 748. 748. 748. 748. 748. 748. 749. 750. 750. 750. 750. 750. 750. 750. 750. 750. 750. 750. 750. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 751. 752. 752. 752. 752. 752. 752. 752. 752. 752. 752. 756. 756. 759. 760. 760. 760. 761. 761. 761. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 762. 763. 763. 763. 763. 763. 763. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 765. 771. 771. 771. 771. 772. 772. 772. 773. 773. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775. 775.1053.1053.1053.1071.1080.1080.1080.1080.1080.1081.1081.1085.1085.1085.1086.1086.1086.1086.1086.1086.1094.1094.1094.1094.1094.1094.1094.1095.1095.1096.1096.1096.1096.1096.1097.1098.1098.1098.1098.1098.1098.1098.1098.1098.1100.1100.1100.1100.1102.1102.1102.1102.1102.1102.1102.1106.1106.1107.1107.1107.1107.1107.1107.1107.1107.1107.1107.1108.1108.1108.1108.1109.1109.1109.1110.1110.1110.1110.1110.1110.1110.1110.1110.1110.1110.1110.1110.1111.1111.1111.1111.1111.1111.1111.1111.1111.1112.1112.1112.1112.1112.1112.1112.1112.1112.1112.1112.1112.1112.1112.1112.1112.1114.1114.1114.1114.1114.1116.1116.1116.1116.1116.1117.1117.1117.1117.1117.1117.1117.1117.1117.1117.1117.1117.1118.1118.1118.1118.1118.1118.1118.1118.1118.1118.1118.1118.1118.1121.1121.1122.1122.1122.1122.1122.1122.1122.1122.1122.1122.1122.1122.1122.1122.1122.1123.1123.1124.1124.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1126.1128.1128.1128.1128.1128.1128.1128.1128.1130.1134.1134.1134.1134.1134.1134.1139.1140.1140.1140.1141.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1143.1144.1145.1145.1145.1145.1145.1145.1145.1145.1145.1145.1146.1146.1146.1146.1146.1146.1146.1146.1146.1146.1146.1146.1146.1146.1146.1146.1147.1147.1147.1147.1147.1147.1147.1147.1147.1149.1152.1152.1152.1152.1152.1152.1152.1152.1152.1152.1152.1152.1152.1153.1153.1153.1153.1154.1154.1154.1154.1154.1154.1154.1154.1154.1154.1155.1155.1155.1155.1155.1155.1155.1155.1155.1155.1155.1162.1174.1174.1174.1174.1174.1174.1174.1174.1174.1174.1174.1174.1174.1174.1174.1178.1178.1178.1179.1179.1179.1179.1179.1179.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1180.1182.1184.1184.1188.1189.1190.1190.1190.1191.1192.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1207.1208.1216.1216.1216.1216.1216.1216.1218.1218.1219.1220.1220.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1222.1264.1265.1265.1265.1265.1265.1265.1269.1269.1270.1271.1271.1277.1277.1277.1277.1277.1277.1278.1281.1281.1281.1281.1281.1281.1282.1282.1282.1284.1284.1284.1284.1284.1288.1289.1289.1289.1289.1289.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1290.1291.1291.1292.1292.1293.1293.1296.1296.1296.1297.1297.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1298.1299.1299.1300.1300.1300.1300.1300.1300.1300.1301.1301.1301.1301.1302.1302.1302.1302.1303.1303.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1304.1305.1305.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1306.1311.1311.1312.1312.1312.1312.1312.1312.1312.1317.1317.1318.1318.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1319.1320.1320.1320.1320.1320.1320.1320.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1321.1453.1455.1455.1455.1455.1456.1456.1456.1456.1456.1456.1456.1457.1457.1457.1457.1457.1457.1459.1460.1460.1460.1460.1460.1460.1460.1460.1497.1497.1497.1497.1497.1498.1498.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 27m17.107s user 25m38.857s sys 0m0.072s Heavy solvent excluded grid being made FORTRAN STOP real 48m26.248s user 35m56.504s sys 0m0.087s