There are 26 ligand heavy atoms Ligand center of coords (x y z): -8.89184615384615 -7.46357692307692 55.2882307692308 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 1445 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1121 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1121 Number of spheres polar: 261, nonpolar: 702, out of current total: 1121 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -20.86416 2.02994 -19.38202 4.44070 43.31000 67.07118 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 336 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 274 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 213 Spheres center of coords (x y z): -10.6456777464789 -9.60717863849765 57.7482316431925 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 6.21338412251303 Final number of output spheres is: 120 Number of polar spheres: 29 Number of nonpolar spheres: 76 Number of spheres that are near neither polar nor nonpolar receptor atoms: 15 Final number of spheres that are from crystallographic ligand: 26