usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 1.02379310344828 12.4500689655172 18.3197931034483
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1516
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 653
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 651
Number of spheres polar: 181, nonpolar: 389, out of current total: 651
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.79001 11.01145 2.61205 22.39102 8.40632 28.28761
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 337
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 291
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 200
Spheres center of coords (x y z): 3.4735359 10.0497163 17.27403245
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.93343580295712
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 48
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 29