usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 27.2448387096774 119.357741935484 37.969935483871
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1296
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 629
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 619
Number of spheres polar: 161, nonpolar: 235, out of current total: 619
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.44989 36.84568 109.37643 129.26422 28.09076 47.96628
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 393
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 337
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 318
Spheres center of coords (x y z): 27.891985 118.849335597484 37.3571406918239
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.30136756114473
Final number of output spheres is: 60
Number of polar spheres: 9
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 33
Final number of spheres that are from crystallographic ligand: 31