usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 27.6284571428571 4.2208 26.1446857142857
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2044
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1201
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1200
Number of spheres polar: 195, nonpolar: 621, out of current total: 1200
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.63945 37.62822 -5.75436 14.19843 16.15857 36.10312
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 722
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 628
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 617
Spheres center of coords (x y z): 28.8795695137764 4.54161110210697 24.9970716531605
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.51643695155432
Final number of output spheres is: 60
Number of polar spheres: 10
Number of nonpolar spheres: 46
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 35