usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): -42.4157714285714 -50.6964571428571 -10.8478285714286
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1324
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 719
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 712
Number of spheres polar: 232, nonpolar: 299, out of current total: 712
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -52.35324 -32.55898 -60.67638 -40.72193 -20.80145 -0.85680
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 433
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 377
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 329
Spheres center of coords (x y z): -44.7238170516718 -49.6116738297873 -7.66892844984802
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.96858511050988
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 35