usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 14.994 54.5491724137931 13.6816206896552
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2036
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1004
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1004
Number of spheres polar: 323, nonpolar: 548, out of current total: 1004
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.01293 24.99060 44.54959 64.54412 3.73172 23.67284
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 508
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 437
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 373
Spheres center of coords (x y z): 16.5208485790885 51.2592923592493 16.2219287935657
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.39945742514524
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 29