usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 15.6410731707317 7.23368292682927 3.76209756097561
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2231
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 914
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 914
Number of spheres polar: 240, nonpolar: 551, out of current total: 914
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.34300 27.13000 -2.76601 17.17503 -6.20699 13.75314
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 275
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 227
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 191
Spheres center of coords (x y z): 11.9696118848168 5.50999764397906 0.759413560209424
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.46829214106815
Final number of output spheres is: 45
Number of polar spheres: 16
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 41