There are 9 ligand heavy atoms Ligand center of coords (x y z): 40.909 34.0145555555556 43.3278888888889 useligsph not on Starting number of spheres from sph/sph cluster 0: 1107 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1045 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1045 Number of spheres polar: 430, nonpolar: 435, out of current total: 1045 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 29.83507 52.69616 22.01900 45.88500 33.30070 55.20227 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 309 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 236 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 40.909 34.0145555555556 43.3278888888889 Center point: 202 xyz: 40.95059 34.61127 43.86007 After continuity checking, number of spheres is: 229 Spheres center of coords (x y z): 42.8453756768559 31.8117358078603 44.1029868995633 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 41.0787685029436 35.6981145920943 42.7846570647603 Average weighted-distance for final elimination is: 25.1676422740803 Final number of output spheres is: 120 Number of polar spheres: 55 Number of nonpolar spheres: 43 Number of spheres that are near neither polar nor nonpolar receptor atoms: 22 Final number of spheres that are from crystallographic ligand: 0