Creating binding-site residue list Creating molecular surface real 0m3.288s user 0m0.500s sys 0m0.307s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:2062 spheres. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 153. 154. 154. 154. 155. 155. 155. 155. 155. 155. 155. 155. 155. 155. 155. 155. 156. 156. 156. 156. 156. 156. 156. 156. 157. 157. 157. 157. 157. 157. 157. 157. 157. 157. 157. 157. 157. 177. 178. 178. 178. 178. 178. 178. 178. 178. 179. 179. 179. 179. 179. 179. 179. 179. 179. 179. 179. 179. 179. 179. 211. 211. 211. 219. 220. 220. 220. 220. 220. 220. 220. 220. 220. 220. 220. 220. 220. 221. 221. 221. 221. 221. 588. 588. 588. 589. 589. 589. 589. 589. 589. 589. 589. 589. 589. 589. 589. 589. 589. 589. 590. 590. 590. 590. 590. 590. 590. 590. 590. 590. 590. 590. 590. 590. 590. 590. 592. 592. 592. 592. 592. 592. 592. 592. 592. 592. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 593. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 594. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 742. 743. 743. 743. 743. 743. 743. 743. 743. 743. 743. 744. 744. 744. 744. 744. 744. 745. 745. 764. 764. 764. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 770. 774. 774. 774. 774. 774. 774. 774. 775. 775. 775. 775. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 776. 777. 777. 777. 778. 778. 778. 858. 858. 858. 858. 858. 858. 858. 858. 858. 860. 861. 861. 861. 861. 861. 861. 861. 861. 862. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 863. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 864. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 865. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866. 866.1364.1364.1364.1366.1366.1366.1366.1366.1368.1368.1368.1368.1368.1368.1368.1368.1368.1369.1369.1369.1369.1369.1369.1369.1369.1369.1369.1369.1369.1369.1369.1369.1369.1373.1373.1373.1373.1373.1373.1373.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1378.1379.1379.1779.1779.1779.1779.1779.1779.1779.1785.1785.1785.1785.1785.1785.1785.1785.1785.1785.1785.1800.1800.1800.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1806.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1807.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1821.1824.1826.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1828.1843.1845.1845.1847.1847.1847.1847.1847.1847.1847.1847.1848.1848.1848.1848.1848.1848.1848.1848.1848.1848.1848.1848.1848.1848.1852.1854.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1855.1856.1856.1856.1856.2374.2374.2376.2376.2376.2379.2379.2379.2380.2380.2380.2380.2380.2380.2380.2380.2380.2380.2380.2380.2380.2380.2380.2380.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2381.2382.2383.2386.2386.2386.2386.2386.2386.2386.2386.2386.2388.2389.2389.2389.2389.2389.2389.2389.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2390.2391.2391.2391.2391.2391.2391.2391.2391.2391.2391.2391.2391.2391.2392.2395.2395.2395.2395.2396.2396.2396.2396.2396.2396.2396.2396.2396.2398.2398.2398.2401.2401.2401.2401.2401.2401.2401.2401.2401.2401.2401.2401.2401.2401.2401.2401.2403.2406.2406.2406.2406.2406.2406.2406.2406.2406.2406.2406.2406.2406.2415.2417.2417.2417.2418.2418.2418.2418.2418.2418.2418.2418.2418.2418.2419.2419.2419.2419.2420.2422.2425.2425.2425.2425.2425.2426.2426.2426.2427.2427.2427.2427.2427.2428.2428.2428.2428.2428.2428.2428.2429.2429.2437.2437.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2449.2450.2450.2450.2450.2450.2450.2450.2450.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2482.2482.2482.2485.2485.2485.2485.2485.2485.2485.2485.2485.2485.2485.2485.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2502.2526.2526.2526.2526.2526.2526.2526.2526.2526.2526.2526.2526.2526.2526.2526.2526.2569.2569.2569.2569.2569.2569.2569.2570.2570.2570.2570.2570.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2572.2574.2574.2574.2574.2574.2574.2574.2574.2574.2577.2577.2577.2577.2577.2577.2577.2577.2577.2577.2577.2577.2577.2577.2577.2577.2577.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2578.2579.2579.2579.2579.2579.2579.2579.2579.2579.2579.2579.2579.2579.2579.2580.2580.2580.2580.2580.2580.2581.2581.2581.2581.2581.2581.2581.2581.2581.2581.2581.2581.2581.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2587.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2588.2589.2589.2589.2589.2589.2589.2589.2602.2602.2602.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2603.2604.2604.2604.2604.2604.2604.2604.2604.2604.2604.2604.2604.2604.2604.2610.2610.2610.2610.2610.2610.2610.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2611.2620.2624.2624.2624.2624.2624.2624.2624.2630.2631.2631.2631.2632.2632.2632.2632.2632.2634.2634.2634.2634.2634.2634.2634.2634.2634.2634.2635.2636.2636.2636.2644.2645.2645.2645.2645.2645.2649.2649.2649.2649.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2653.2663.2663.2665.2665.2665.2665.2665.2665.2665.2665.2665.2665.2665.2666.2666.2666.2666.2667.2667.2667.2667.2674.2677.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2684.2696.2696.2696.2696.2696.2696.2696.2696.2696.2696.2696.2696.2706.2706.2706.2706.2706.2706.2706.2706.2707.2707.2707.2707.2707.2707.2707.2707.2736.2736.2792.2792.2792.2792.2792.2792.2792.2792.2792.2795.2797.2797.2798.2798.2798.2798.2798.2798.2798.2798.2798.2798.2798.2798.2798.2799.2804.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2805.2806.2806.2806.2806.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2807.2808.2808.2808.2808.2808.2808.2808.2808.2808.2808.2808.2808.2808.2808.2808.2808.2809.2812.2812.2822.2822.2825.2825.2825.2825.2825.2825.2825.2825.2825.2825.2825.2825.2827.2827.2827.2827.2827.2827.2827.2827.2827.2827.2831.2831.2831.2831.2831.2831.2831.2832.2832.2832.2832.2844.2844.2844.2844.2844.2844.2844.2844.2844.2844.2844.2844.2844.2844.2844.2845.2845.2845.2845.2845.2845.2845.2845.2845.2845.2845.2845.2845.2845.2845.2851.2851.2852.2852.2852.2852.2853.2853.2855.2855.2855.2855.2855.2855.2855.2855.2855.2855.2855.2855.2855.2855.2855.2855.2860.2866.2866.2866.2866.2866.2879.2879.2879.2879.2879.2879.2879.2879.2879.2879.2879.2879.2879.2879.2883.2889.2889.2889.2890.2890.2909.2915.2915.2915.2916.2936.2936.2936.2936.2936.2936.2936.2936.2936.2936.2937.2937.2937.2937.2937.2937.2938.2938.3136.3136.3136.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3141.3142.3142.3142.3142.3142.3142.3142.3160.3160.3160.3160.3160.3160.3160.3160.3160.3160.3160.3160.3161.3161.3161.3161.3161.3161.3161.3161.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3163.3171.3171.3171.3171.3171.3171.3171.3171.3171.3171.3171.3171.3171.3171.3171.3171.3171.3172.3172.3172.3172.3172.3194.3194.3194.3194.3196.3653.3653.3653.3653.3653.3653.3653.3664.3664.3667.3667.3667.3667.3667.3668.3668.3668.3668.3668.3668.3668.3677.3677.3677.3677.3677.3677.3695.3695.3695.3695.3696.3696.3696.3697.3697.3697.3697.3697.3697.3697.3697.3697.3697.3697.3703.3703.3703.3703.3703.3703.3704.3704.3704.3704.3704.3704.3704.3704.3704.3704.3704.3704.3704.3704.3705.3705.3705.3705.3705.3705.3705.3711.3711.3711.3711.3711.3711.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3712.3717.3717.3717.3717.3717.3718.3719.3719.3730.3730.3731.3731.3731.3738.3738.3738.3738.3738.3738.3738.3738.3739.3739.3739.3748.3748.3748.3748.3749.3749.3749.3749.3749.3749.3749.3749.3749.3749.3749.3749.3749.3749.3749.3749.3749.3750.3758.3758.3758.3758.3758.3758.3758.3758.3760.3760.3760.3760.3760.3760.3760.3760.3760.3760.3760.3761.3761.3761.3761.3761.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3762.3795.3795.3795.3796.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.3797.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 13m29.158s user 12m8.668s sys 0m0.073s Heavy solvent excluded grid being made FORTRAN STOP real 16m55.232s user 16m54.868s sys 0m0.105s