There are 39 ligand heavy atoms
Ligand center of coords (x y z): 45.2509743589744 45.763358974359 45.191717948718
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 14791
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9606
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9606
Number of spheres polar: 6377, nonpolar: 2470, out of current total: 9606
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 35.02900 57.24100 33.76640 57.75720 33.19920 57.18640
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1031
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 484
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 469
Spheres center of coords (x y z): 46.4270098081023 46.0380226012793 47.1391185501066
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.38084215294288
Final number of output spheres is: 120
Number of polar spheres: 50
Number of nonpolar spheres: 66
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 39