usefragsph not on
There are 18 ligand heavy atoms
Ligand center of coords (x y z): 3.13844444444444 65.8469444444444 67.7822777777778
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1257
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 640
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 640
Number of spheres polar: 238, nonpolar: 260, out of current total: 640
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.82922 12.15192 55.89330 75.44870 58.73117 77.77859
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 365
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 318
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 284
Spheres center of coords (x y z): 1.98041228873239 64.6038227816901 69.7894076760564
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.81829613762142
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 18