usefragsph not on
There are 34 ligand heavy atoms
Ligand center of coords (x y z): 2.52738235294118 63.6505 68.4284705882353
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1311
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 682
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 682
Number of spheres polar: 223, nonpolar: 345, out of current total: 682
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.45753 11.82510 53.65400 73.61101 59.80600 78.41576
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 374
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 330
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 292
Spheres center of coords (x y z): 1.74582530821918 63.5963685616439 69.3963852054795
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.90122429433326
Final number of output spheres is: 60
Number of polar spheres: 10
Number of nonpolar spheres: 41
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 34