usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 3.73466666666667 65.7495238095238 63.5484285714286
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1219
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 689
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 689
Number of spheres polar: 272, nonpolar: 308, out of current total: 689
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.09278 13.54219 55.85902 75.30924 54.90478 73.53800
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 333
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 258
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 240
Spheres center of coords (x y z): 2.146718875 64.5633748333334 66.70850125
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.83921524150909
Final number of output spheres is: 60
Number of polar spheres: 23
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 21