There are 6 ligand heavy atoms Ligand center of coords (x y z): 4.84533333333333 64.1096666666667 62.5645 useligsph not on Starting number of spheres from sph/sph cluster 0: 820 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 662 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 658 Number of spheres polar: 271, nonpolar: 307, out of current total: 658 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.82491 14.94758 52.28130 76.03766 54.70738 74.55428 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 181 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 133 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 4.84533333333333 64.1096666666667 62.5645 Center point: 71 xyz: 4.55548 63.80554 62.50043 After continuity checking, number of spheres is: 113 Final number of output spheres is: 113 Number of polar spheres: 43 Number of nonpolar spheres: 49 Number of spheres that are near neither polar nor nonpolar receptor atoms: 21 Final number of spheres that are from crystallographic ligand: 0