usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 2.35479487179487 64.0872051282051 67.5948974358975
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1408
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 780
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 780
Number of spheres polar: 289, nonpolar: 371, out of current total: 780
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.60067 11.86961 54.32058 74.08265 57.66100 77.58039
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 259
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 189
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 162
Spheres center of coords (x y z): 1.31001561728395 63.5731751234568 69.6741521604938
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.7932416212984
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 39