usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 3.77704761904762 66.1915238095238 64.3415238095238
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1012
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 606
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 606
Number of spheres polar: 217, nonpolar: 291, out of current total: 606
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.17261 13.73339 56.36364 75.59646 60.32400 74.30602
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 152
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 119
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 115
Spheres center of coords (x y z): 2.23965339130435 64.8799863478261 67.5245088695652
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.78621280074602
Final number of output spheres is: 45
Number of polar spheres: 19
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 21