usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): 3.96954545454546 65.1019090909091 62.6579090909091
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 938
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 565
WARNING: removing a crystallographic sphere that is distance 0.880205657786861 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 564
Number of spheres polar: 200, nonpolar: 305, out of current total: 564
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.40358 13.79349 56.17859 74.51569 54.69852 72.62183
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 273
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 232
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 226
Spheres center of coords (x y z): 2.38505694690265 65.2694196902655 66.5413223893805
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.53581993839089
Final number of output spheres is: 60
Number of polar spheres: 32
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 10