usefragsph not on
There are 10 ligand heavy atoms
Ligand center of coords (x y z): 5.6214 69.0111 62.5662
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 813
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 598
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 598
Number of spheres polar: 287, nonpolar: 268, out of current total: 598
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.06735 15.49375 59.31724 79.00127 53.28444 72.53913
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 168
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 115
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 99
Spheres center of coords (x y z): 2.64934737373737 66.5732086868687 65.3589945454546
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.37705490487835
Final number of output spheres is: 45
Number of polar spheres: 22
Number of nonpolar spheres: 19
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 10