usefragsph not on
There are 7 ligand heavy atoms
Ligand center of coords (x y z): 4.69185714285714 68.9588571428571 64.6842857142857
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 987
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 659
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 659
Number of spheres polar: 319, nonpolar: 272, out of current total: 659
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.29264 14.62915 58.97066 78.95438 55.27379 74.65801
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 291
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 233
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 188
Spheres center of coords (x y z): 2.08344212765957 66.5033562765957 67.1820187234042
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.09757666709447
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 7