usefragsph not on
There are 10 ligand heavy atoms
Ligand center of coords (x y z): 91.7765 51.1686 21.7701
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1011
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 577
WARNING: removing a crystallographic sphere that is distance 1.03117942182726 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 576
Number of spheres polar: 229, nonpolar: 299, out of current total: 576
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 89.56100 101.76519 41.22978 61.09984 11.83710 28.37182
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 250
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 211
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 199
Spheres center of coords (x y z): 96.1274746733668 52.5061010552764 21.1334971356784
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.13952138146275
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 9