usefragsph not on
There are 10 ligand heavy atoms
Ligand center of coords (x y z): 4.6232 66.1228 62.7159
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 931
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 526
WARNING: removing a crystallographic sphere that is distance 1.03094956229682 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 525
Number of spheres polar: 200, nonpolar: 271, out of current total: 525
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.35589 13.54210 56.18661 76.03679 55.12339 72.68991
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 244
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 203
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 189
Spheres center of coords (x y z): 2.28802693121693 65.0024731746032 67.099208994709
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.49486709743178
Final number of output spheres is: 60
Number of polar spheres: 26
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 9