usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): 2.53657894736842 64.1771842105263 67.3988421052631
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1349
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 723
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 723
Number of spheres polar: 216, nonpolar: 377, out of current total: 723
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.44245 11.77954 54.36273 74.09257 57.62889 77.39585
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 382
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 336
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 305
Spheres center of coords (x y z): 1.70050468852459 63.8140115081968 69.1131820983607
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.70890268374742
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 40
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 38