usefragsph not on
There are 6 ligand heavy atoms
Ligand center of coords (x y z): 28.8933333333333 16.8696666666667 12.5006666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 970
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 665
WARNING: removing a crystallographic sphere that is distance 0.74897396483456 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 664
Number of spheres polar: 263, nonpolar: 321, out of current total: 664
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.39589 38.89138 8.47103 26.85678 3.16405 22.32280
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 179
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 137
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 121
Spheres center of coords (x y z): 31.3854638016529 21.8528241322314 11.7523578512397
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.62923529769815
Final number of output spheres is: 45
Number of polar spheres: 19
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 5