There are 16 ligand heavy atoms Ligand center of coords (x y z): 28.8725625 17.268625 12.7956875 useligsph not on Starting number of spheres from sph/sph cluster 0: 1043 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 861 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 855 Number of spheres polar: 446, nonpolar: 329, out of current total: 855 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 16.90605 40.87112 5.75573 29.12882 0.95620 24.77915 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 262 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 182 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 28.8725625 17.268625 12.7956875 Center point: 91 xyz: 29.36893 16.91195 12.65875 After continuity checking, number of spheres is: 125 Spheres center of coords (x y z): 32.32464368 21.74433264 10.89652384 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 27.4567572035899 12.5280606991025 13.9763708077468 Average weighted-distance for final elimination is: 25.7903715368789 Final number of output spheres is: 120 Number of polar spheres: 74 Number of nonpolar spheres: 33 Number of spheres that are near neither polar nor nonpolar receptor atoms: 13 Final number of spheres that are from crystallographic ligand: 0