usefragsph not on
There are 7 ligand heavy atoms
Ligand center of coords (x y z): 45.5198571428571 57.8862857142857 38.3397142857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1004
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 655
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 655
Number of spheres polar: 275, nonpolar: 315, out of current total: 655
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 35.53878 55.45123 47.88663 67.85990 29.23201 48.24371
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 164
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 128
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 101
Spheres center of coords (x y z): 48.5297201980198 60.9192874257426 38.0385823762376
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.59487532851615
Final number of output spheres is: 45
Number of polar spheres: 20
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 7